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  5. Tin_g25187

Tin_g25187


Description : not classified & original description: none


Gene families : OG0000491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g25187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00175790 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G15120 No alias VQ motif-containing protein 0.02 OrthoFinder output from all 47 species
AT5G65170 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g037220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10441 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08318 CAMBP25, ATCAMBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23299 CAMBP25, ATCAMBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18655 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00666.t1 Aspi01Gene00666 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67465 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.11G031500.1 Ceric.11G031500 not classified & original description: pacid=50595562... 0.08 OrthoFinder output from all 47 species
Ceric.15G042200.1 Ceric.15G042200 not classified & original description: pacid=50639493... 0.03 OrthoFinder output from all 47 species
Ceric.16G036400.1 Ceric.16G036400 not classified & original description: pacid=50589400... 0.04 OrthoFinder output from all 47 species
Ceric.22G024300.1 Ceric.22G024300 not classified & original description: pacid=50614461... 0.08 OrthoFinder output from all 47 species
Dac_g14608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g14821 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40600 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g17707 CAMBP25, ATCAMBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08213 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g11366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_06947 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37990 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g07690.1 LOC_Os02g07690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g48710.1 LOC_Os07g48710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_6292874g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_77606g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9255g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_935655g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44462 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g45903 CAMBP25, ATCAMBP25 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g19050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g031990.1.1 Solyc02g031990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g073950.2.1 Solyc04g073950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g51416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011002_P001 Zm00001e011002 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013751_P001 Zm00001e013751 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e017385_P001 Zm00001e017385 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025135_P001 Zm00001e025135 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037746_P001 Zm00001e037746 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039220_P001 Zm00001e039220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 282 302
No external refs found!