Tin_g24854


Description : not classified & original description: none


Gene families : OG0009089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009089_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24854
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00159p00021150 EMB2261,... Pentatricopeptide repeat-containing protein At3g49170,... 0.05 OrthoFinder output from all 47 species
Als_g25225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42186 CRR2 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Cba_g06650 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06804 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_04445 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_05882 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Gb_14850 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_29033g0010 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.1 OrthoFinder output from all 47 species
Smo62636 CRR22 Pentatricopeptide repeat-containing protein At4g14820... 0.05 OrthoFinder output from all 47 species
Spa_g51576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 207 254
IPR002885 Pentatricopeptide_repeat 4 50
IPR002885 Pentatricopeptide_repeat 105 152
No external refs found!