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  5. Tin_g24571

Tin_g24571 (NF-YB6, L1L)


Aliases : NF-YB6, L1L

Description : transcription factor *(LEC) involved in seed maturation & original description: none


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24571
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT2G13570 NF-YB7 nuclear factor Y, subunit B7 0.02 OrthoFinder output from all 47 species
AT5G47640 NF-YB2 nuclear factor Y, subunit B2 0.03 OrthoFinder output from all 47 species
Cba_g07215 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.54 NF-YB3 Nuclear transcription factor Y subunit B-3... 0.01 OrthoFinder output from all 47 species
Gb_00520 NF-YB3 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Nbi_g00372 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Nbi_g02688 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Spa_g40949 NF-YB2 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 77 140
No external refs found!