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  5. Tin_g24181

Tin_g24181


Description : not classified & original description: none


Gene families : OG0000419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24181

Target Alias Description ECC score Gene Family Method Actions
Aop_g07881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z009300.1 Ceric.1Z009300 not classified & original description: pacid=50632775... 0.03 OrthoFinder output from all 47 species
Ceric.1Z009500.1 Ceric.1Z009500 not classified & original description: pacid=50632785... 0.03 OrthoFinder output from all 47 species
Ceric.1Z238400.1 Ceric.1Z238400 not classified & original description: pacid=50596978... 0.03 OrthoFinder output from all 47 species
Gb_11718 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g44707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 85 176
No external refs found!