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  5. Tin_g24140

Tin_g24140 (YDK1, AUR3, GH3.2, GH3-2, BRU6)


Aliases : YDK1, AUR3, GH3.2, GH3-2, BRU6

Description : not classified & original description: none


Gene families : OG0000489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24140
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Adi_g018743 JAR1, FIN219 jasmonoyl-amino acid synthetase *(JAR1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g07609 JAR1, FIN219 jasmonoyl-amino acid synthetase *(JAR1) & original... 0.03 OrthoFinder output from all 47 species
Als_g38142 DFL2, GH3-10 jasmonoyl-amino acid synthetase *(JAR1) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62919.t1 DFL2, GH3-10,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G077300.1 JAR1, FIN219,... not classified & original description: pacid=50598317... 0.05 OrthoFinder output from all 47 species
Ehy_g12014 JAR1, FIN219 jasmonoyl-amino acid synthetase *(JAR1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g12015 JAR1, FIN219 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19959 JAR1, FIN219 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26836 DFL2, GH3-10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30452 DFL2, GH3-10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g050280.3.1 JAR1, FIN219,... jasmonoyl-amino acid synthetase (JAR1) 0.03 OrthoFinder output from all 47 species
Spa_g16305 DFL2, GH3-10 jasmonoyl-amino acid synthetase *(JAR1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 2 160
No external refs found!