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  5. Tin_g23631

Tin_g23631 (HAP1, MEE63, MAGO)


Aliases : HAP1, MEE63, MAGO

Description : component *(Magoh) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0003958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23631

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00121p00130180 HAP1, MEE63,... RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Ala_g04475 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cba_g11052 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.21 HAP1, MEE63, MAGO RNA processing.RNA quality control Exon Junction complex... 0.01 OrthoFinder output from all 47 species
Cre09.g392692 HAP1, MEE63, MAGO RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Dcu_g07294 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
LOC_Os08g01660.1 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g18880.1 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
MA_10426266g0010 HAP1, MEE63, MAGO component Magoh of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Nbi_g24780 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ppi_g12567 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Spa_g01904 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEA Interproscan
CC GO:0035145 exon-exon junction complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR004023 Mago_nashi 9 58
IPR004023 Mago_nashi 57 130
No external refs found!