Tin_g23441


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23441

Target Alias Description ECC score Gene Family Method Actions
Adi_g004274 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020425 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086048 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13481 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16530 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16579 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16974 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g34749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19296 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26644 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39960 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0016.g014413 No alias not classified & original description: CDS=1-1530 0.07 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20428 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20751 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g32572 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67204 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.02G028200.1 OTP84, Ceric.02G028200 not classified & original description: pacid=50583866... 0.08 OrthoFinder output from all 47 species
Ceric.06G033000.1 Ceric.06G033000 not classified & original description: pacid=50620249... 0.05 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.05 OrthoFinder output from all 47 species
Ceric.13G031800.1 Ceric.13G031800 not classified & original description: pacid=50636627... 0.05 OrthoFinder output from all 47 species
Ceric.17G003100.1 Ceric.17G003100 not classified & original description: pacid=50617164... 0.03 OrthoFinder output from all 47 species
Ceric.18G023200.1 Ceric.18G023200 not classified & original description: pacid=50622130... 0.05 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.1 OrthoFinder output from all 47 species
Ceric.31G032600.1 CRR22, Ceric.31G032600 not classified & original description: pacid=50574071... 0.06 OrthoFinder output from all 47 species
Ceric.32G026500.1 CRR2, Ceric.32G026500 not classified & original description: pacid=50597944... 0.04 OrthoFinder output from all 47 species
Ceric.36G022000.1 Ceric.36G022000 not classified & original description: pacid=50568812... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.1 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19095 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43237 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07750 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08698 EMB2744 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g36033 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01014727001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.09 OrthoFinder output from all 47 species
GSVIVT01015468001 No alias Pentatricopeptide repeat-containing protein At1g31430... 0.06 OrthoFinder output from all 47 species
GSVIVT01017378001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
GSVIVT01035618001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 OrthoFinder output from all 47 species
GSVIVT01036943001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.06 OrthoFinder output from all 47 species
GSVIVT01037332001 CRR22 Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
Gb_10113 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.07 OrthoFinder output from all 47 species
Gb_18462 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.1 OrthoFinder output from all 47 species
Gb_21430 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g38610.1 LOC_Os08g38610 Pentatricopeptide repeat-containing protein At1g26900,... 0.04 OrthoFinder output from all 47 species
Len_g04103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_3502g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
MA_953793g0020 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Msp_g07853 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17336 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23175 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28762 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Msp_g31780 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g33982 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g46846 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g27635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58725 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19965 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g23595 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05910 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06358 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18941 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g40990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45723 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56969 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g58269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60900 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g01624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g35674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g095690.2.1 Solyc01g095690 Pentatricopeptide repeat-containing protein At4g01030,... 0.04 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.02 OrthoFinder output from all 47 species
Spa_g06014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g26897 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g26996 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Zm00001e001200_P001 Zm00001e001200 Pentatricopeptide repeat-containing protein At5g59600... 0.05 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.07 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.06 OrthoFinder output from all 47 species
Zm00001e024311_P001 Zm00001e024311 Pentatricopeptide repeat-containing protein At1g09410,... 0.04 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 694 750
IPR002885 Pentatricopeptide_repeat 226 252
IPR002885 Pentatricopeptide_repeat 198 221
IPR002885 Pentatricopeptide_repeat 641 660
IPR002885 Pentatricopeptide_repeat 26 51
IPR002885 Pentatricopeptide_repeat 125 154
IPR002885 Pentatricopeptide_repeat 498 524
IPR002885 Pentatricopeptide_repeat 425 455
IPR002885 Pentatricopeptide_repeat 526 556
IPR002885 Pentatricopeptide_repeat 322 368
IPR002885 Pentatricopeptide_repeat 558 605
No external refs found!