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Tin_g23387


Description : pre-60S ribosomal subunit assembly factor *(NOP16) & original description: none


Gene families : OG0005949 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23387

Target Alias Description ECC score Gene Family Method Actions
Solyc09g075030.3.1 Solyc09g075030 pre-60S ribosomal subunit assembly factor (NOP16) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 151 219
IPR019002 Ribosome_biogenesis_Nop16 55 134
No external refs found!