Tin_g23375 (ATRABG2, ATRAB7A, RAB7A)

Aliases : ATRABG2, ATRAB7A, RAB7A

Description : not classified & original description: none

Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g23375
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
Cba_g04963	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g43029	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g49977	ATRABG3B,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_485625g0010	ATRABG3B,...	G-class RAB GTPase	0.01	OrthoFinder output from all 47 species
Msp_g11025	ATRABG3B,...	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g18575	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g53336	AtRABG1, RABG1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g55417	ATRABG2, ATRAB7A, RAB7A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g051680.4.1	ATRABG3B,...	G-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Spa_g21415	ATRABG3B,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0006597	spermine biosynthetic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
BP	GO:0008215	spermine metabolic process	IEP	HCCA
BP	GO:0008216	spermidine metabolic process	IEP	HCCA
BP	GO:0008295	spermidine biosynthetic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	181

External Links

No external refs found!

Tin_g23375 (ATRABG2, ATRAB7A, RAB7A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation