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  5. Tin_g23361

Tin_g23361


Description : ubiquiTin-dependent protease *(DA1) & original description: none


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23361
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Adi_g008069 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19088.t1 Aspi01Gene19088 ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G042400.1 Ceric.11G042400 ubiquitin-dependent protease *(DA1) & original... 0.04 OrthoFinder output from all 47 species
Dac_g00851 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g40490.1 LOC_Os12g40490 ubiquitin receptor regulatory protein (DA1) 0.02 OrthoFinder output from all 47 species
Lfl_g03952 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24748 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g079910.3.1 DAR2, Solyc03g079910 ubiquitin receptor regulatory protein (DA1) 0.01 OrthoFinder output from all 47 species
Solyc05g052910.4.1 DAR2, Solyc05g052910 ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species
Zm00001e001183_P005 DAR2, Zm00001e001183 ubiquitin receptor regulatory protein (DA1) 0.01 OrthoFinder output from all 47 species
Zm00001e005086_P004 Zm00001e005086 ubiquitin receptor regulatory protein (DA1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022087 DA1-like_dom 254 457
IPR001781 Znf_LIM 105 158
No external refs found!