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  5. Tin_g23356

Tin_g23356 (TAF15b)


Aliases : TAF15b

Description : not classified & original description: none


Gene families : OG0003283 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23356

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00073330 TAF15b,... Transcription initiation factor TFIID subunit 15b... 0.05 OrthoFinder output from all 47 species
Cba_g07541 TAF15b not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14874 TAF15b not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20592 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g36395 TAF15b not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06028 TAF15b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11171 TAF15b not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g082220.4.1 TAF15b, Solyc06g082220 Transcription initiation factor TFIID subunit 15b... 0.03 OrthoFinder output from all 47 species
Spa_g22431 TAF15b not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 333 361
IPR001876 Znf_RanBP2 52 82
No external refs found!