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  5. Tin_g22324

Tin_g22324


Description : assembly factor (eIF1) of eIF1 & original description: none


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g22324

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266770 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Als_g43580 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67771.t1 Aspi01Gene67771 assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67772.t1 Aspi01Gene67772 assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67773.t1 Aspi01Gene67773 assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G073900.1 Ceric.08G073900 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Lfl_g20659 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10279 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_21900V3.1 Pp3c16_21900 Translation initiation factor SUI1 family protein 0.01 OrthoFinder output from all 47 species
Solyc07g064150.4.1 Solyc07g064150 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
Zm00001e035143_P001 Zm00001e035143 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 136 210
IPR006594 LisH 10 36
No external refs found!