Smo429390 (PACid_15416241)


Aliases : PACid_15416241

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12) CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525) BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1) Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615 Bacteria - 304057 Metazoa - 8776 Fungi - 6428 Plants - 5794 Viruses - 2 Other Eukaryotes - 45311 (source: NCBI BLink). & (chl4|516135 : 644.0


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo429390
Cluster HCCA cluster: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.02 Gene family
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.02 Gene family
GSVIVT01017191001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017201001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01031314001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01033804001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01034745001 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
LOC_Os02g21340 Os02g0318450,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os08g43120 Os08g0544400 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
LOC_Os09g16449 Os09g0333500 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo412699 PACid_15413246 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo417266 PACid_15402308 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo441717 PACid_15410131 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo96758 PACid_15410129 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo99541 PACid_15417312 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Solyc01g101070.3.1 Solyc01g101070.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc05g055330.3.1 Solyc05g055330.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc11g067000.2.1 Solyc11g067000.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d009037 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d021647 GRMZM2G415529 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Zm00001d044443 GRMZM2G143139 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d052726 GRMZM2G451792 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013581 PDR_assoc 600 650
No external refs found!