Tin_g21585


Description : C2H2 subclass Di19 transcription factor & original description: none


Gene families : OG0000852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21585

Target Alias Description ECC score Gene Family Method Actions
Adi_g022193 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G072400.1 Ceric.06G072400 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06363 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031200001 No alias Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g48800.2 LOC_Os05g48800 Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ore_g06092 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g48046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo405842 HRB1 Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e031458_P003 Zm00001e031458 Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e032417_P003 HRB1, Zm00001e032417 Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027935 Di19_C 218 329
IPR008598 Di19_Zn-bd 144 196
No external refs found!