Tin_g21470

Description : E3 ubiquiTin ligase *(RMA/MUSE) & original description: none

Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g21470

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00264430	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Dcu_g03679	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.05	OrthoFinder output from all 47 species
Len_g59221	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g054080.3.1	RMA1, ATRMA1,...	RING-HC-class E3 ligase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018957	Znf_C3HC4_RING-type	187	227

External Links

No external refs found!