Tin_g21390


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21390

Target Alias Description ECC score Gene Family Method Actions
Adi_g010386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g05828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25758 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18752 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18763 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.04 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.04 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.04 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29515 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G031100.1 Ceric.10G031100 not classified & original description: pacid=50612341... 0.03 OrthoFinder output from all 47 species
Ceric.1Z025200.1 Ceric.1Z025200 not classified & original description: pacid=50576842... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.04 OrthoFinder output from all 47 species
Dac_g28876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g01384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14856 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14937 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26750 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28104 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10319 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15348 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59802 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03944 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002603 CRR22 not classified & original description: CDS=1-2808 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003855 No alias not classified & original description: CDS=1-1500 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004367 No alias not classified & original description: CDS=1-738 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006820 No alias not classified & original description: CDS=1-3141 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007300 No alias not classified & original description: CDS=1-4008 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018767 No alias not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01164 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12894 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45095 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 557 587
IPR002885 Pentatricopeptide_repeat 180 201
IPR002885 Pentatricopeptide_repeat 527 551
IPR002885 Pentatricopeptide_repeat 415 437
IPR002885 Pentatricopeptide_repeat 693 721
IPR002885 Pentatricopeptide_repeat 106 152
IPR002885 Pentatricopeptide_repeat 442 487
IPR002885 Pentatricopeptide_repeat 208 251
IPR002885 Pentatricopeptide_repeat 323 371
No external refs found!