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  5. Tin_g21386

Tin_g21386 (NFD1)


Aliases : NFD1

Description : component *(bL21m) of large mitoribosomal-subunit proteome & original description: none


Gene families : OG0004500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004500_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21386
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT4G30930 NFD1 Ribosomal protein L21 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000513 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.36G065300.1 NFD1, Ceric.36G065300 component *(bL21m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_38840 NFD1 component mtRPL21 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g08614 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Nbi_g34048 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g13357 No alias component *(bL21m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Spa_g08674 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e032388_P001 NFD1, Zm00001e032388 component mtRPL21 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR028909 L21p-like 170 270
No external refs found!