Tin_g21261


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21261

Target Alias Description ECC score Gene Family Method Actions
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g055247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11257 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g41595 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16715 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78384 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16457 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g31119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35668 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g06431 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.05 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Lfl_g05976 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g23152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34200 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g43227 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04435 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05273 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05289 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06887 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g14613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29710 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45723 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018685 No alias not classified & original description: CDS=1-1332 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020215 No alias not classified & original description: CDS=1-5316 0.06 OrthoFinder output from all 47 species
Spa_g33897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 163 195
IPR002885 Pentatricopeptide_repeat 198 237
IPR002885 Pentatricopeptide_repeat 399 446
IPR002885 Pentatricopeptide_repeat 298 346
IPR002885 Pentatricopeptide_repeat 505 547
IPR002885 Pentatricopeptide_repeat 475 500
IPR002885 Pentatricopeptide_repeat 100 125
IPR002885 Pentatricopeptide_repeat 273 296
IPR002885 Pentatricopeptide_repeat 575 599
No external refs found!