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  5. Tin_g21109

Tin_g21109 (NF-YB3)


Aliases : NF-YB3

Description : component *(NF-YB) of NF-Y transcription factor complex & original description: none


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21109

Target Alias Description ECC score Gene Family Method Actions
AT5G47670 NF-YB6, L1L nuclear factor Y, subunit B6 0.03 OrthoFinder output from all 47 species
Als_g56322 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Dac_g21439 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01022214001 NF-YB3 RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
Gb_24990 NF-YB6, L1L component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g29970.1 NF-YB3, LOC_Os03g29970 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Ore_g28570 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Ppi_g01827 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Smo442185 NF-YB3 RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
Smo69246 NF-YB2 RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
Solyc06g009010.1.1 NF-YB5, Solyc06g009010 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Zm00001e001980_P001 NF-YB3, Zm00001e001980 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e035517_P001 NF-YB3, Zm00001e035517 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 45 109
No external refs found!