Tin_g21094 (RPS11)


Aliases : RPS11

Description : component *(uS11m) of small mitoribosomal-subunit proteome & original description: none


Gene families : OG0004584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004584_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21094
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
ATCG00750 RPS11 ribosomal protein S11 0.06 OrthoFinder output from all 47 species
Aev_g01915 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aev_g37240 RPS11 component *(uS11c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ala_g07144 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Als_g62775 RPS11 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g18582 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cba_g15340 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.05G049400.1 RPS11, Ceric.05G049400 component *(uS11c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.1Z122600.1 RPS11, Ceric.1Z122600 not classified & original description: pacid=50617110... 0.04 OrthoFinder output from all 47 species
Ceric.1Z196300.1 RPS11, Ceric.1Z196300 not classified & original description: pacid=50586509... 0.04 OrthoFinder output from all 47 species
Ceric.1Z237100.1 RPS11, Ceric.1Z237100 not classified & original description: pacid=50569351... 0.04 OrthoFinder output from all 47 species
Cre06.g288400 RPS11 30S ribosomal protein S11, chloroplastic OS=Chlorella vulgaris 0.01 OrthoFinder output from all 47 species
Dcu_g39431 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Dde_g49431 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Gb_08606 NFD3 component mtRPS11 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os04g16838.1 RPS11, LOC_Os04g16838 component psRPS11 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
LOC_Os10g21332.1 RPS11, LOC_Os10g21332 component psRPS11 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Len_g39780 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Mp4g09870.1 No alias Ribosomal protein S11, mitochondrial OS=Marchantia... 0.06 OrthoFinder output from all 47 species
Mpzg00730.1 No alias component psRPS11 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Nbi_g20255 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.17 OrthoFinder output from all 47 species
Pir_g07424 RPS11 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Solyc00g500030.1.1 RPS11, Solyc00g500030 component psRPS11 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Solyc00g500075.1.1 RPS11, Solyc00g500075 component psRPS11 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g02162 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 38 149
No external refs found!