Tin_g21039


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21039

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00050160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00203500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
Adi_g020053 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07565 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g16245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.05 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.05 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 OrthoFinder output from all 47 species
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.05 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47387 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.05 OrthoFinder output from all 47 species
Mp6g20670.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Msp_g13348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.04 OrthoFinder output from all 47 species
Pir_g01695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g35938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.01 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g065340.3.1 Solyc09g065340 PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc09g076010.3.1 Solyc09g076010 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g04858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e031101_P001 Zm00001e031101 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 21 105
IPR032308 TDBD 731 782
No external refs found!