- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOP1, TRN1
Description : not classified & original description: none
Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00055p00138540 | LOP1, TRN1,... | Protein TORNADO 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g24699 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene68465.t1 | LOP1, TRN1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene68470.t1 | LOP1, TRN1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g17165 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G016000.1 | Ceric.18G016000 | not classified & original description: pacid=50622446... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G016400.1 | Ceric.18G016400 | not classified & original description: pacid=50620952... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G043500.1 | LOP1, TRN1,... | not classified & original description: pacid=50566189... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10563 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g14654 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g20580 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g21708 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22269 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22544 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28571 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g36702 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39298 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g40231 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43211 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08144 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g10111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g17501 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g26452 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g28705 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15715 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20797 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23017 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g31881 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38222 | LOP1, TRN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41660 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g34586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07082 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32964 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14611 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25087 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g37194 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39802 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |