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  5. Tin_g20842

Tin_g20842 (HTR12, CENH3)


Aliases : HTR12, CENH3

Description : not classified & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20842

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020960.54 No alias Histone H3.3 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Tin_g05786 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e014888_P001 Zm00001e014888 histone (H3) 0.05 OrthoFinder output from all 47 species
Zm00001e040856_P001 Zm00001e040856 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 44 105
No external refs found!