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  5. Tin_g20769

Tin_g20769 (EMB1135)


Aliases : EMB1135

Description : not classified & original description: none


Gene families : OG0002623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002623_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20769

Target Alias Description ECC score Gene Family Method Actions
Als_g08125 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13353 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036703001 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ppi_g02413 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10872 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR026937 SBNO_Helicase_C_dom 722 1013
IPR019787 Znf_PHD-finger 641 687
IPR039187 SNO_AAA 164 464
No external refs found!