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  5. Tin_g20736

Tin_g20736


Description : autophagosome cargo receptor protein *(NBR1) & original description: none


Gene families : OG0000431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20736

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00211440 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.cargo... 0.02 OrthoFinder output from all 47 species
Adi_g059454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47269 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.01 OrthoFinder output from all 47 species
Aop_g07666 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46310.t1 Aspi01Gene46310 autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Len_g13762 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10374 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g34970 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Msp_g09896 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Msp_g20511 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17555 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g31492 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g01323 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.01 OrthoFinder output from all 47 species
Zm00001e014993_P002 Zm00001e014993 NBR1 autophagosome autophagic adapter protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR032350 N_BRCA1_central 268 368
IPR000270 PB1_dom 3 73
No external refs found!