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  5. Tin_g20558

Tin_g20558 (ATHMA2, HMA2)


Aliases : ATHMA2, HMA2

Description : P1B-type heavy metal cation-transporTing ATPase *(HMA) & original description: none


Gene families : OG0001874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20558
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Ala_g19004 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Als_g13908 ATHMA4, HMA4 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Cba_g07744 ATHMA4, HMA4 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Ceric.28G033300.1 ATHMA2, HMA2,... P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Gb_30489 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase (HMA) 0.04 OrthoFinder output from all 47 species
Len_g08687 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Msp_g13976 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ore_g28881 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Pir_g37550 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016421 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Smo118425 ATHMA2, HMA2 Solute transport.primary active transport.P-type ATPase... 0.02 OrthoFinder output from all 47 species
Smo60690 ATHMA2, HMA2 Solute transport.primary active transport.P-type ATPase... 0.03 OrthoFinder output from all 47 species
Zm00001e009374_P002 ATHMA2, HMA2,... P1B-type heavy metal cation-transporting ATPase (HMA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!