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  5. Tin_g20479

Tin_g20479 (HY3, OOP1, PHYB)


Aliases : HY3, OOP1, PHYB

Description : temperature sensor protein *(PHY-B) & original description: none


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20479

Target Alias Description ECC score Gene Family Method Actions
Ala_g02630 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16495 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23525 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33149 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37198.t1 HY3, OOP1, PHYB,... phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59146.t1 HY3, OOP1, PHYB,... temperature sensor protein *(PHY-B) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63547.t1 HY3, OOP1, PHYB,... phytochrome photoreceptor *(PHY) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g20972 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05468 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g32315 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19479 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29042 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07013 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012090 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g11691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16277 No alias temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24706 No alias temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14459 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001462_P001 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019211 phosphatase activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003018 GAF 222 403
IPR003594 HATPase_C 1003 1119
IPR013515 Phytochrome_cen-reg 416 589
IPR013654 PAS_2 73 188
IPR013767 PAS_fold 621 736
IPR013767 PAS_fold 752 874
No external refs found!