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  5. Tin_g20399

Tin_g20399


Description : not classified & original description: none


Gene families : OG0000816 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20399
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G23410 FAO3, ATFAO3 fatty alcohol oxidase 3 0.02 OrthoFinder output from all 47 species
Aev_g14724 No alias fatty alcohol oxidase *(FAO) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39870 FAO3, ATFAO3 Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10427421g0010 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.02 OrthoFinder output from all 47 species
MA_232327g0010 No alias Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_26272g0010 No alias Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_697389g0010 No alias Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_875536g0020 No alias Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000322 No alias not classified & original description: CDS=1-543 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001808 No alias not classified & original description: CDS=1-2460 0.04 OrthoFinder output from all 47 species
Solyc08g005630.3.1 Solyc08g005630 Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g075240.3.1 Solyc08g075240 Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g090350.3.1 FAO3, ATFAO3,... Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 362 624
IPR007867 GMC_OxRtase_C 720 849
No external refs found!