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  5. Tin_g20386

Tin_g20386


Description : apocytochrome b component of cytochrome c reductase complex & original description: none


Gene families : OG0002807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20386
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT2G07727 No alias Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal 0.08 OrthoFinder output from all 47 species
ATCG00720 PETB photosynthetic electron transfer B 0.1 OrthoFinder output from all 47 species
Aev_g24354 No alias apocytochrome b component of cytochrome c reductase... 0.17 OrthoFinder output from all 47 species
Aev_g27762 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.15 OrthoFinder output from all 47 species
Ala_g35856 No alias apocytochrome b component of cytochrome c reductase... 0.09 OrthoFinder output from all 47 species
Als_g39169 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Aob_g16275 No alias apocytochrome b component of cytochrome c reductase... 0.17 OrthoFinder output from all 47 species
Aop_g43076 No alias apocytochrome b component of cytochrome c reductase... 0.15 OrthoFinder output from all 47 species
Azfi_s0264.g060907 No alias not classified & original description: CDS=1-306 0.04 OrthoFinder output from all 47 species
Cba_g67442 No alias apocytochrome b component of cytochrome c reductase... 0.12 OrthoFinder output from all 47 species
Ceric.05G041700.1 PETB, Ceric.05G041700 not classified & original description: pacid=50577646... 0.07 OrthoFinder output from all 47 species
Ceric.05G044900.1 PETB, Ceric.05G044900 not classified & original description: pacid=50577209... 0.04 OrthoFinder output from all 47 species
Ceric.05G051500.1 PETB, Ceric.05G051500 not classified & original description: pacid=50578079... 0.07 OrthoFinder output from all 47 species
Ceric.1Z163200.1 PETB, Ceric.1Z163200 not classified & original description: pacid=50596955... 0.08 OrthoFinder output from all 47 species
Ceric.1Z190500.1 Ceric.1Z190500 not classified & original description: pacid=50582113... 0.16 OrthoFinder output from all 47 species
Ceric.1Z200500.1 Ceric.1Z200500 not classified & original description: pacid=50618881... 0.11 OrthoFinder output from all 47 species
Ceric.1Z276900.1 Ceric.1Z276900 not classified & original description: pacid=50569323... 0.11 OrthoFinder output from all 47 species
Ceric.1Z297500.1 Ceric.1Z297500 not classified & original description: pacid=50597032... 0.11 OrthoFinder output from all 47 species
Ceric.1Z311700.1 Ceric.1Z311700 not classified & original description: pacid=50567778... 0.11 OrthoFinder output from all 47 species
Ceric.29G003700.1 PETB, Ceric.29G003700 not classified & original description: pacid=50624590... 0.05 OrthoFinder output from all 47 species
Ceric.36G044700.1 PETB, Ceric.36G044700 not classified & original description: pacid=50568540... 0.1 OrthoFinder output from all 47 species
Ceric.38G008400.1 PETB, Ceric.38G008400 not classified & original description: pacid=50579337... 0.07 OrthoFinder output from all 47 species
Dcu_g39082 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Dde_g47960 No alias apocytochrome b component of cytochrome c reductase... 0.07 OrthoFinder output from all 47 species
GSVIVT01012279001 No alias Cytochrome b OS=Zea mays 0.03 OrthoFinder output from all 47 species
GSVIVT01018702001 No alias Cytochrome b OS=Zea mays 0.03 OrthoFinder output from all 47 species
GSVIVT01018703001 No alias Cytochrome b OS=Zea mays 0.03 OrthoFinder output from all 47 species
Gb_16762 No alias cytochrome b component of cytochrome c reductase complex 0.08 OrthoFinder output from all 47 species
Gb_17283 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.05 OrthoFinder output from all 47 species
Gb_20951 No alias Cytochrome b OS=Oryza sativa subsp. japonica... 0.1 OrthoFinder output from all 47 species
Gb_31169 No alias cytochrome b component of cytochrome c reductase complex 0.04 OrthoFinder output from all 47 species
LOC_Os01g57942.1 PETB, LOC_Os01g57942 apocytochrome b component PetB of cytochrome b6/f complex 0.08 OrthoFinder output from all 47 species
LOC_Os04g16846.1 PETB, LOC_Os04g16846 apocytochrome b component PetB of cytochrome b6/f complex 0.08 OrthoFinder output from all 47 species
LOC_Os10g21324.1 PETB, LOC_Os10g21324 apocytochrome b component PetB of cytochrome b6/f complex 0.08 OrthoFinder output from all 47 species
Len_g40106 No alias apocytochrome b component of cytochrome c reductase... 0.08 OrthoFinder output from all 47 species
MA_10392603g0010 No alias Cytochrome b OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g00740.1 PETB Cytochrome b6 OS=Marchantia polymorpha... 0.03 OrthoFinder output from all 47 species
Nbi_g20498 No alias apocytochrome b component of cytochrome c reductase... 0.2 OrthoFinder output from all 47 species
Ore_g00397 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Ore_g06623 No alias apocytochrome b component of cytochrome c reductase... 0.03 OrthoFinder output from all 47 species
Pir_g06448 No alias apocytochrome b component of cytochrome c reductase... 0.17 OrthoFinder output from all 47 species
Sam_g14362 No alias apocytochrome b component of cytochrome c reductase... 0.09 OrthoFinder output from all 47 species
Smo139134 No alias Cytochrome b OS=Marchantia polymorpha 0.08 OrthoFinder output from all 47 species
Solyc00g047200.1.1 Solyc00g047200 Cytochrome b OS=Solanum tuberosum (sp|p29757|cyb_soltu : 130.0) 0.03 OrthoFinder output from all 47 species
Solyc00g500240.1.1 Solyc00g500240 cytochrome b component of cytochrome c reductase complex 0.05 OrthoFinder output from all 47 species
Solyc00g500260.1.1 Solyc00g500260 cytochrome b component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Solyc00g500364.1.1 Solyc00g500364 cytochrome b component of cytochrome c reductase complex 0.05 OrthoFinder output from all 47 species
Solyc09g050020.3.1 Solyc09g050020 Cytochrome b OS=Vicia faba (sp|p05718|cyb_vicfa : 382.0) 0.03 OrthoFinder output from all 47 species
Spa_g23500 No alias apocytochrome b component of cytochrome c reductase... 0.12 OrthoFinder output from all 47 species
Zm00001e017084_P001 Zm00001e017084 cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
Zm00001e023252_P001 Zm00001e023252 cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
Zm00001e042242_P001 Zm00001e042242 cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
Zm00001e042335_P001 Zm00001e042335 cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
Zm00001e042463_P001 Zm00001e042463 cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 56 243
IPR005798 Cyt_b/b6_C 297 398
No external refs found!