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  5. Tin_g20320

Tin_g20320 (SCO3, QWRF1)


Aliases : SCO3, QWRF1

Description : not classified & original description: none


Gene families : OG0000808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20320
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00037320 EDE1, QWRF5,... Cytoskeleton.microtubular network.microtubule Tubulin... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00052220 QWRF8,... Cytoskeleton.microtubular network.microtubule Tubulin... 0.05 OrthoFinder output from all 47 species
Adi_g014772 SCO3, QWRF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16226 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47588 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71920.t1 QWRF8, Aspi01Gene71920 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.37G061400.1 QWRF2, Ceric.37G061400 not classified & original description: pacid=50616607... 0.07 OrthoFinder output from all 47 species
Dac_g01735 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04896 QWRF8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10890 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009361001 QWRF2 QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037854001 QWRF2 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os03g10820.1 QWRF2, LOC_Os03g10820 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g34320.1 QWRF8, LOC_Os08g34320 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g20510.1 QWRF2, LOC_Os10g20510 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g07094 QWRF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36936 QWRF8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436767g0010 QWRF4 accessory component EDE1 of Augmin gamma-TuRC recruiting complex 0.02 OrthoFinder output from all 47 species
Msp_g45550 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014115 QWRF8 not classified & original description: CDS=445-2868 0.02 OrthoFinder output from all 47 species
Sam_g29607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g078000.3.1 QWRF2, Solyc04g078000 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g054390.1.1 QWRF3, Solyc07g054390 QWRF motif-containing protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g26567 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50146 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005768_P003 QWRF2, Zm00001e005768 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007573 QWRF 526 848
No external refs found!