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  5. Tin_g19963

Tin_g19963 (ATCSP2, GRP2, CSDP2, CSP2)


Aliases : ATCSP2, GRP2, CSDP2, CSP2

Description : cold-responsive mRNA chaperone *(CSD) & original description: none


Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g19963
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00167350 No alias External stimuli response.temperature.Csd... 0.03 OrthoFinder output from all 47 species
Aop_g09578 No alias RNA chaperone (CSP) of mRNA quality control & original... 0.03 OrthoFinder output from all 47 species
Mp1g04040.1 GRP2B, ATGRP2B, ATCSP4 RNA chaperone (CSP). mRNA chaperone (CSD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 126 141
IPR002059 CSP_DNA-bd 8 72
No external refs found!