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  5. Tin_g19831

Tin_g19831 (FCA)


Aliases : FCA

Description : transcription factor *(FCA/SSF) & original description: none


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g19831

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00168380 FCA,... Flowering time control protein FCA OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g021978 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32791 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43236 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13021 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011013001 RBP-DR1, AtRBP-DR1 RNA-binding protein BRN1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os09g03610.1 FCA, LOC_Os09g03610 no description available(sp|q6k271|fca_orysj : 775.0) 0.02 OrthoFinder output from all 47 species
Pnu_g13897 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24304 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26456 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g058450.3.1 FCA, Solyc01g058450 Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g56153 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 169 231
IPR000504 RRM_dom 78 140
IPR001202 WW_dom 578 604
No external refs found!