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  5. Tin_g19823

Tin_g19823


Description : not classified & original description: none


Gene families : OG0006598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006598_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g19823

Target Alias Description ECC score Gene Family Method Actions
AT5G19850 No alias alpha/beta-Hydrolases superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g041157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09211 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G079000.1 Ceric.13G079000 not classified & original description: pacid=50636049... 0.06 OrthoFinder output from all 47 species
Cre12.g558550 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g31060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00856 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g16970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os07g38830.1 LOC_Os07g38830 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g39177 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g27336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12996 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g05507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30991 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g58765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14626 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e035340_P001 Zm00001e035340 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 95 347
No external refs found!