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  5. Tin_g19814

Tin_g19814


Description : pecTin acetylesterase *(PAE) & original description: none


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g19814
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G09550 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
AT1G57590 No alias Pectinacetylesterase family protein 0.02 OrthoFinder output from all 47 species
AT3G09405 No alias Pectinacetylesterase family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene44826.t1 Aspi01Gene44826 pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44826.t2 Aspi01Gene44826 pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G054100.1 Ceric.07G054100 pectin acetylesterase *(PAE) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
MA_52077g0010 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Mp4g05670.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g43584 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29610 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03265 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g025580.1.1 Solyc03g025580 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g014380.3.1 Solyc08g014380 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Solyc08g074990.3.1 Solyc08g074990 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Solyc12g019440.3.1 Solyc12g019440 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Spa_g21771 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028575_P002 Zm00001e028575 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e035651_P001 Zm00001e035651 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e037910_P001 Zm00001e037910 pectin acetylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 68 377
No external refs found!