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  5. Tin_g19161

Tin_g19161


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g19161

Target Alias Description ECC score Gene Family Method Actions
Ala_g38904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.02 OrthoFinder output from all 47 species
Len_g07378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.02 OrthoFinder output from all 47 species
Msp_g04828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015168 No alias not classified & original description: CDS=1-606 0.03 OrthoFinder output from all 47 species
Smo52385 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.02 OrthoFinder output from all 47 species
Smo74408 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.03 OrthoFinder output from all 47 species
Spa_g17198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 16 64
IPR002885 Pentatricopeptide_repeat 86 129
No external refs found!