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  5. Tin_g18034

Tin_g18034 (PRA1.B4)


Aliases : PRA1.B4

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g18034

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00265420 PRA1.F3, PRA8,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
AT4G29658 PRA1.C prenylated RAB acceptor 1.C 0.03 OrthoFinder output from all 47 species
AT5G07110 PRA1.B6 prenylated RAB acceptor 1.B6 0.02 OrthoFinder output from all 47 species
Adi_g007847 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084011 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00225 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01011 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G057500.1 PRA1.B4, Ceric.02G057500 B-G-class Rab-GDF protein & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020828.4 PRA1.G1 Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Dac_g08868 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Gb_35591 No alias B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Gb_38741 PRA1.B1 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Msp_g08254 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g08496 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06102 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g04246 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Smo271785 PRA1.B2 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Solyc01g097230.4.1 PRA1.E, Solyc01g097230 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Spa_g10214 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10215 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11088 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40187 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 118 258
No external refs found!