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Tin_g17993


Description : D-arabinose-5-phosphate isomerase & original description: none


Gene families : OG0006389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006389_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17993
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Adi_g023295 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17580 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27664 No alias D-arabinose-5-phosphate isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12708 No alias D-arabinose-5-phosphate isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G032000.1 Ceric.31G032000 D-arabinose-5-phosphate isomerase & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05459 No alias D-arabinose-5-phosphate isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c23_13620V3.1 Pp3c23_13620 Sugar isomerase (SIS) family protein 0.01 OrthoFinder output from all 47 species
Pp3c2_23370V3.1 Pp3c2_23370 Sugar isomerase (SIS) family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014347 No alias D-arabinose-5-phosphate isomerase & original... 0.04 OrthoFinder output from all 47 species
Sam_g19861 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001347 SIS_dom 69 195
IPR000644 CBS_dom 294 346
IPR000644 CBS_dom 225 282
No external refs found!