Tin_g17904

Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g17904
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
AT5G46430	No alias	Ribosomal protein L32e	0.04	OrthoFinder output from all 47 species
Ala_g32062	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Als_g31659	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Aop_g17117	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g20751	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Aop_g50189	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.22G081000.1	Ceric.22G081000	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cre06.g289550	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Dac_g17402	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Dcu_g24494	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.12	OrthoFinder output from all 47 species
Dcu_g35080	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ehy_g18228	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01021377001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Gb_36437	No alias	component RPL32 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os08g41300.1	LOC_Os08g41300	component RPL32 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os09g32532.1	LOC_Os09g32532	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Lfl_g21979	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Mp7g12480.1	No alias	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Nbi_g45103	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g13764	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c1_32490V3.1	Pp3c1_32490	Ribosomal protein L32e	0.01	OrthoFinder output from all 47 species
Pp3c2_9590V3.1	Pp3c2_9590	Ribosomal protein L32e	0.01	OrthoFinder output from all 47 species
Ppi_g20028	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ppi_g20844	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g26022	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g47089	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Sam_g26800	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Sam_g47289	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Solyc08g006900.3.1	Solyc08g006900	component RPL32 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Spa_g17123	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g34311	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Tin_g11973	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e003623_P002	Zm00001e003623	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e021938_P001	Zm00001e021938	component RPL32 of LSU proteome component	0.01	OrthoFinder output from all 47 species
Zm00001e034604_P001	Zm00001e034604	component RPL32 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Zm00001e034606_P001	Zm00001e034606	component RPL32 of LSU proteome component	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001515	Ribosomal_L32e	17	122

External Links

No external refs found!

Tin_g17904

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation