Tin_g17643


Description : not classified & original description: none


Gene families : OG0000006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17643

Target Alias Description ECC score Gene Family Method Actions
Als_g61527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G026800.1 Ceric.05G026800 not classified & original description: pacid=50579209... 0.03 OrthoFinder output from all 47 species
Dde_g19804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36576 ORF102 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!