Tin_g17624


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17624

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00222920 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015739 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g016795 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019623 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g030218 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g073485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087678 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g118106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05283 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06555 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10827 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31741 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32451 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32674 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33357 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37714 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28532 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29262 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g61599 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24762 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43918 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24377 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31457 EMB2261 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58100.1 OTP85, LOC_Os03g58100 RNA editing factor (OTP85) 0.02 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Len_g56238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05475 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06187 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07668 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37539 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_16823g0010 CRR22 RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
MA_18165g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_64083g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14457 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63850 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03497 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13340 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56081 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.02 OrthoFinder output from all 47 species
Spa_g01489 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17180 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46731 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51828 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28830 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 190 238
IPR002885 Pentatricopeptide_repeat 293 341
IPR002885 Pentatricopeptide_repeat 393 441
IPR002885 Pentatricopeptide_repeat 96 125
IPR002885 Pentatricopeptide_repeat 469 494
IPR002885 Pentatricopeptide_repeat 368 391
IPR002885 Pentatricopeptide_repeat 497 527
IPR002885 Pentatricopeptide_repeat 569 595
No external refs found!