Tin_g17206

Description : subunit F of V-type ATPase peripheral V1 subcomplex & original description: none

Gene families : OG0003775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003775_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g17206
Cluster	HCCA: Cluster_181

Target	Alias	Description	ECC score	Gene Family Method
AT4G02620	No alias	vacuolar ATPase subunit F family protein	0.02	OrthoFinder output from all 47 species
Adi_g085204	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Aev_g40699	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Als_g21446	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.05	OrthoFinder output from all 47 species
Als_g35940	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Aop_g02660	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.07	OrthoFinder output from all 47 species
Dcu_g00075	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.06	OrthoFinder output from all 47 species
Ppi_g15870	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Solyc02g068450.3.1	Solyc02g068450	subunit F of V-type ATPase peripheral V1 subcomplex	0.04	OrthoFinder output from all 47 species
Spa_g19313	No alias	subunit F of V-type ATPase peripheral V1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Zm00001e035810_P001	Zm00001e035810	subunit F of V-type ATPase peripheral V1 subcomplex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	IEA	Interproscan
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	None	Extended
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004784	superoxide dismutase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008218	ATPase_V1-cplx_f_g_su	9	110

External Links

No external refs found!

Tin_g17206

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation