Tin_g17151 (DMS1, DRD1, CHR35)

Aliases : DMS1, DRD1, CHR35

Description : not classified & original description: none

Gene families : OG0001261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001261_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g17151

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00029140	CHR42,...	RNA biosynthesis.siRNA biogenesis.CLSY1/2...	0.02	OrthoFinder output from all 47 species
AT2G16390	DMS1, DRD1, CHR35	SNF2 domain-containing protein / helicase...	0.03	OrthoFinder output from all 47 species
Dde_g10564	CLSY, CHR38	regulatory protein *(CLSY3/4) of transacting siRNA...	0.03	OrthoFinder output from all 47 species
Lfl_g08811	DMS1, DRD1, CHR35	regulatory protein *(CLSY3/4) of transacting siRNA...	0.03	OrthoFinder output from all 47 species
MA_109115g0010	DMS1, DRD1, CHR35	RDR2-polymerase regulator protein CLSY3/4	0.02	OrthoFinder output from all 47 species
MA_15897g0010	chr31	RDR2-polymerase accessory protein (CLSY1/2)	0.04	OrthoFinder output from all 47 species
Solyc01g109970.3.1	DMS1, DRD1,...	chromatin remodeling factor (DRD1). component DRD1 of...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	510	845

External Links

No external refs found!