Tin_g17147


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17147

Target Alias Description ECC score Gene Family Method Actions
Adi_g026470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22076 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30867 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02808 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03408 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0036.g025743 No alias not classified & original description: CDS=1-2553 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029993 No alias not classified & original description: CDS=1-1878 0.05 OrthoFinder output from all 47 species
Azfi_s0113.g045914 No alias not classified & original description: CDS=1-2748 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.07 OrthoFinder output from all 47 species
Azfi_s0128.g048778 No alias not classified & original description: CDS=1-2676 0.04 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Azfi_s0194.g057202 No alias not classified & original description: CDS=1-2553 0.04 OrthoFinder output from all 47 species
Azfi_s0283.g063072 No alias not classified & original description: CDS=1-2475 0.04 OrthoFinder output from all 47 species
Cba_g20788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G015100.1 Ceric.04G015100 not classified & original description: pacid=50632156... 0.03 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.05 OrthoFinder output from all 47 species
Ceric.28G015300.1 Ceric.28G015300 not classified & original description: pacid=50570535... 0.05 OrthoFinder output from all 47 species
Ceric.33G057300.1 Ceric.33G057300 not classified & original description: pacid=50607177... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g05644 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g16645 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23534 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430355g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_185098g0010 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
MA_3502g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
MA_376862g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_501007g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_9384g0020 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.06 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05469 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27539 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g02164 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g05942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04827 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g12193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 188 236
IPR002885 Pentatricopeptide_repeat 593 640
IPR002885 Pentatricopeptide_repeat 390 434
IPR002885 Pentatricopeptide_repeat 291 336
IPR002885 Pentatricopeptide_repeat 264 286
IPR002885 Pentatricopeptide_repeat 495 524
IPR002885 Pentatricopeptide_repeat 91 119
IPR002885 Pentatricopeptide_repeat 667 691
No external refs found!