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  5. Tin_g17118

Tin_g17118


Description : not classified & original description: none


Gene families : OG0002040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17118

Target Alias Description ECC score Gene Family Method Actions
Ala_g06118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22161 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.12G073300.1 Ceric.12G073300 not classified & original description: pacid=50601046... 0.07 OrthoFinder output from all 47 species
Dac_g10818 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g03483 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01013859001 No alias Protein ORANGE-GREEN, chloroplastic OS=Cucumis melo 0.03 OrthoFinder output from all 47 species
LOC_Os02g43500.1 LOC_Os02g43500 Protein ORANGE, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g41298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g39342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp5g07410.1 No alias Protein ORANGE, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo56798 No alias Protein ORANGE, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc09g010110.3.1 Solyc09g010110 Protein ORANGE-GREEN, chloroplastic OS=Cucumis melo... 0.03 OrthoFinder output from all 47 species
Spa_g05860 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!