1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g16349

Tin_g16349 (SDE1, RDR6, SGS2)


Aliases : SDE1, RDR6, SGS2

Description : ssRNA polymerase *(RDR6) & original description: none


Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16349

Target Alias Description ECC score Gene Family Method Actions
Ala_g33595 SDE1, RDR6, SGS2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14760 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14066 ATRDRP1, RDR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14128 ATRDRP1, RDR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 412 990
No external refs found!