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  5. Tin_g16340

Tin_g16340 (ATCHX19, CHX19)


Aliases : ATCHX19, CHX19

Description : proton:monovalent cation antiporter *(CHX) & original description: none


Gene families : OG0000230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16340
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G05580 ATCHX23, CHX23 cation/H+ exchanger 23 0.01 OrthoFinder output from all 47 species
AT1G64170 CHX16, ATCHX16 cation/H+ exchanger 16 0.03 OrthoFinder output from all 47 species
AT3G53720 ATCHX20, CHX20 cation/H+ exchanger 20 0.01 OrthoFinder output from all 47 species
Adi_g060898 CHX17, ATCHX17 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Als_g12015 ATCHX18, CHX18 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene19476.t1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene60902.t1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.01 OrthoFinder output from all 47 species
Ceric.04G051600.1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.06 OrthoFinder output from all 47 species
Ceric.28G057200.1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Dac_g07141 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Dac_g31528 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.01 OrthoFinder output from all 47 species
Dac_g39667 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01007481001 chx28 Solute transport.carrier-mediated transport.CPA... 0.01 OrthoFinder output from all 47 species
GSVIVT01007482001 chx28 Solute transport.carrier-mediated transport.CPA... 0.01 OrthoFinder output from all 47 species
GSVIVT01017721001 ATCHX19, CHX19 Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
GSVIVT01024627001 CHX15, ATCHX15 Solute transport.carrier-mediated transport.CPA... 0.01 OrthoFinder output from all 47 species
GSVIVT01037524001 ATCHX1, CHX1 Solute transport.carrier-mediated transport.CPA... 0.01 OrthoFinder output from all 47 species
MA_24508g0010 ATCHX20, CHX20 Cation/H(+) antiporter 20 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_5796458g0010 ATCHX20, CHX20 Cation/H(+) antiporter 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g16881 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g009240.4.1 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Solyc08g081820.4.1 ATCHX18, CHX18,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Spa_g41125 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003243_P001 ATCHX19, CHX19,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 49 438
No external refs found!