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  5. Tin_g16246

Tin_g16246 (TCH3, ATCAL4)


Aliases : TCH3, ATCAL4

Description : calcium sensor *(CML) & original description: none


Gene families : OG0002443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16246
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Aob_g26308 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G088500.1 CML42, Ceric.11G088500 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G088700.1 CML42, Ceric.11G088700 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G089700.1 TCH3, ATCAL4,... calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g19337 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004655 CML42 calcium sensor *(CML) & original description: CDS=1-621 0.03 OrthoFinder output from all 47 species
Sam_g04951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 167 232
IPR002048 EF_hand_dom 74 135
No external refs found!