AMTR_s00016p00229010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.219

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG_01_0000193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000193_tree ,
OG_02_0010100 (LandPlants) Phylogenetic Tree(s): OG_02_0010100_tree ,
OG_03_0010148 (SeedPlants) Phylogenetic Tree(s): OG_03_0010148_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00229010
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.02 Archaeplastida
GSVIVT01019645001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01029329001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.05 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.08 Archaeplastida
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
AMTR_s00029p00090040 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 LandPlants
AMTR_s00103p00133280 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.04 LandPlants
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 LandPlants
MA_7826635g0010 No alias no hits & (original description: none) 0.06 LandPlants
AMTR_s00103p00133280 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.04 SeedPlants
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 SeedPlants

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004813 OPT 38 234
No external refs found!