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  5. Tin_g15961

Tin_g15961


Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15961

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00190970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00191030 ATRD22, RD22,... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00076p00180150 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT1G23760 JP630, PG3 BURP domain-containing protein 0.02 OrthoFinder output from all 47 species
Aev_g16373 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16152.t1 Aspi01Gene16152 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72190.t1 USPL1, ATUSPL1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72191.t1 USPL1, ATUSPL1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g039069 No alias not classified & original description: CDS=1-924 0.03 OrthoFinder output from all 47 species
Dde_g18865 PG1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os01g53240.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os05g13490.1 LOC_Os05g13490 BURP domain-containing protein 8 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os08g38810.1 ATRD22, RD22,... BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os09g16010.1 PG2, LOC_Os09g16010 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species
Len_g19467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10182290g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_10429742g0010 PG2 BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
MA_161552g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Msp_g23446 PG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09461 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g062300.3.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc08g068130.1.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Tin_g20244 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20830 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019897_P001 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 122 319
No external refs found!