Tin_g15554 (SUA)


Aliases : SUA

Description : not classified & original description: none


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15554

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00089100 SUA,... SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G54230 SUA suppressor of abi3-5 0.02 OrthoFinder output from all 47 species
Adi_g014405 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06676 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37096 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22735 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63953 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19169 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34127.t1 SUA, Aspi01Gene34127 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G030500.1 SUA, Ceric.01G030500 not classified & original description: pacid=50592465... 0.04 OrthoFinder output from all 47 species
Cre03.g184350 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g14899 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20662 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013204001 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_12277 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g07070.1 SUA, LOC_Os02g07070 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g08592 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g29782 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10091679g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g04870.1 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g20001 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo402018 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo407112 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR041591 OCRE 615 665
IPR000504 RRM_dom 472 538
IPR000504 RRM_dom 315 373
No external refs found!